Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MAAATAAAALAAADPPPAMPQAAGAGGPTTRRDFYWLRSFLAGGIAGCCAKTTVAPLDRVKVLLQAHNHHYKHLGVFSALRAVPQKEGFLGLYKGNGAMMIRIFPYGAIQFMAFEHYKTLITTKLGISGHVHRLMAGSMAGMTAVICTYPLDMVRVRLAFQVKGEHSYTGIIHAFKTIYAKEGGFFGFYRGLMPTILGMAPYAGVSFFTFGTLKSVGLSHAPTLLGRPSSD-NPNV-----LVLKTHVNLLCGGVAGAI----AQTISYPFDVTRRRMQLGTVLPEFEKCLTMRDTMKYVYGHHGIRKGLYRGLSLNYIRCIPSQAVAFTTYELMKQFFHLN |
| 3PMI Chain:A ((54-125)) | ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------SLKSLKHFDCKEKQTLLNQAREDFNQDIGWCVSLITDYRVRLGCGSFAGSFLEYYAADISYPVRKSIQQDVL-------------------------------------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 3PMI.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -9686 for 266 contacts (-36.4/contact) +
2D Compatibility (PS) -6195 + (NN) 1939 + (LL) 19364
1D Compatibility (HY) -5600 + (ID) 1000
Total energy: -1178.0 ( -4.43 by residue)
QMean score : -0.008
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