Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MTHQDLSITAKLINGGVAGLVGVTCVFPIDLAKTRLQNQ---------HGKAMYKGMIDCLMKTARAEGFFGMYRGAAVNLTLVTPEKAIKLAANDFFRRLLMEDGMQRNLKMEMLAGCGAGMCQVVVTCPMEMLKIQLQDAGRLAVHHQGSASAPSTSRSYTTGSASTHRRPSATLIAWELL-RTQGLAGLYRGLGATLLRDIPFS---IIYFPLFANL---NNLGFNELAGKASFAHSFVSGCVAGSIAAVAVTPLDVLKTRIQTLKKGLGEDMYSGITDCARKLWIQEGPSAFMKGAGCRALVIAPLFGIAQGVYFIGIGERILKCFD |
| 2LCK Chain:A ((13-272)) | -------MTVKFLGAGTAACIADLITFPLDTAKVRLQIQGESQGLVRTAASAQYRGVLGTILTMVRTEGPRSLYNGLVAGLQRQMSFASVRIGLYDSVKQFYTKGSEHAGIGSRLLAGSTTGALAVAVAQPTDVVKVRFQAQAR----------------------AGGGRRYQSTVEAYKTIAREEGIRGLWKGTSPNVARNAIVNCAELVTYDLIKDTLLKANLMTDDLP-----CH-FTSAFGAGFCTTVIASPVDVVKTRY--MNSALGQ--YHSAGHCALTMLRKEGPRAFYKGFMPSFLRLGSWNVVMFVTYEQLKRALMAAYQS |
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General information:
TITO was launched using:
| RESULT:
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Template: 2LCK.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -42779 for 1263 contacts (-33.9/contact) +
2D Compatibility (PS) -25325 + (NN) -972 + (LL) 1616
1D Compatibility (HY) -12000 + (ID) 3600
Total energy: -83060.0 ( -65.76 by residue)
QMean score : 0.011
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