Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MTEDKVTGTLVFTVITAVLGSFQFGYDIGVINAPQQVIISHYRHVLGVPLDDRKAINNYVINSTDELPTISYSMNPKPTPWAEEETVAAAQLITMLWSLSVSSFAVGGMTASFFGGWLGDTLGRIKAMLVANIL---SLVGALL--MGFSKLGPSHIL--IIAG--------RSISGLYCGLISGLVPMYIGEIAPTALRGALGTFHQLAIVTGILISQIIGLEFILG-------NYDLWHILLGLSGVRAILQSLLLFFCPESPRYLYIKLDEEVKAKQSLKRLRGYDDVTKDINEMRKEREEASSEQKVSIIQLFTNSSYRQPILVALMLHVAQQFSGINGIFYYSTSIFQTAGISKPV--YATIGVGAVNMVFTAVSVFLVEKAGRRSLFLIGMSGMFVCAIFM-SVGLVLLNKFSWMSYVSMIAIFLFVSFFEIGPGPIPWFMVAEFFSQGPRPAALAIAAFSNWTCNFIVALCFQY-------IADFCGPYVFFLFA--GVLLAFTLFTFFKVPETKGKSFEEIAAEFQKKSGSAHRPKAAVEMKFLGATETV |
| 4GBY Chain:A ((61-479)) | ----------------------------------------------------------------------------------------------------VASALIGCIIGGALGGYCSNRFGRRDSLKIAAVLFFISGVGSAWPELGFTSINPDNTVPVYLAGYVPEFVIYRIIGGIGVGLASMLSPMYIAELAPAHIRGKLVSFNQFAIIFGQLLVYCVNY-FIARSGDASWLNTDGWRYMFASECIPALLFLMLLYTVPESPRWLMSRGKQE-QAEGILRKIMGNTLATQAVQEIKHSLDHG--RKTGGRLLMFGVGV----IVIGVMLSIFQQFVGINVVLYYAPEVFKTLGASTDIALLQTIIVGVINLTFTVLAIMTVDKFGRKPLQIIGALGM---AIGMFSLGTAFYTQAP--GIVALLSMLFYVAAFAMSWGPVCWVLLSEIFPNAIRGKALAIAVAAQWLANYFVSWTFPMMDKNSWLVAHFHNGFSYWIYGCMGVLAALFMWKF--VPETKGKTLEELEALWE------------------------ |
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General information:
TITO was launched using:
| RESULT:
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Template: 4GBY.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -285944 for 3251 contacts (-88.0/contact) +
2D Compatibility (PS) -40053 + (NN) -9473 + (LL) 10196
1D Compatibility (HY) -41600 + (ID) 6650
Total energy: -373524.0 ( -114.90 by residue)
QMean score : 0.321
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