Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MGTQKVTPALIFAIT-VATIGSFQFGYNTGVINAPEKIIKEFINKTLTDKGNAPPSEVLLTSLWSLSVAIFSVGGMIGSFSVGLFVNRFGRRNSMLIVNLLAVTGGC-----FMGLCKV----------AKSVEMLILGRLVIGLFCGLCTGFVPMYIGEISPTALRGAFGTLNQLGIVVGILVAQIFGLEFILG--------SEELWPLLLGFTILPAILQSAALPFCPESPRFLLINRKEEENAKQILQRLWGTQDVSQDIQEMKD--ESARMSQEKQVTVLELFRVSSYRQPIIISIVLQLSQQLSGINAVFYYSTGIFKDAGVQEPI-YATIGAGVVNTIFTVVSLFLVERAGRRTLHMIGLGGMAFCSTLMTVSLLLKDNYNGMSFVCIGAILVFVAFFEIGPGPIPWFIVAELFSQGPRPAAMAVAGCSNWTSNFLVGLLFPS------AAHYLGAYVFIIFTGFLITFLAFTFFKVPETRGRTFEDITRAFEGQAHGADRSGKDGVMEMNSIEPAKETTTNV |
| 4JA4 Chain:A ((9-479)) | ---------YIFSITLVATLGGLLFGYDTAVISGT----VESLNTVFVAPQNL--SESAANSLLGFCVASALIGCIIGGALGGYCSNRFGRRDSLKIAAVLFFISGVGSAWPELGFTSINPDNTVPVYLAGYVPEFVIYRIIGGIGVGLASMLSPMYIAELAPAHIRGKLVSFNQFAIIFGQLL--VYCVNYFIARSGDASWLNTDGWRYMFASECIPALLFLMLLYTVPESPRWLM-----QEQAEGILRKIMGNTLATQAVQEIKHSLDHG------------MFGVGV----IVIGVMLSIFQQFVGINVVLYYAPEV----------LLQTIIVGVINLTFTVLAIMTVDKFGRKPLQIIGALGMAI--GMFSLGTAFYTQAPGI--VALLSMLFYVAAFAMSWGPVCWVLLSEIFPNAIRGKALAIAVAAQWLANYFVSWTFPMMDKNSW-----NGFSYWIYGCMGVLAALFMWKFVPETKGKTLEELEALWE------------------------------ |
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General information:
TITO was launched using:
| RESULT:
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Template: 4JA4.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -363399 for 3426 contacts (-106.1/contact) +
2D Compatibility (PS) -41551 + (NN) -8252 + (LL) 5452
1D Compatibility (HY) -46400 + (ID) 6850
Total energy: -461000.0 ( -134.56 by residue)
QMean score : 0.335
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