Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MAGAGPKRRALAAPAAEEKEEAREKMLAAKSADGSAPAGEGEGVTLQRNITLLNGVAIIVGTIIGSGIFVTPTGVLKEAGSPGLALVVWAACGVFSIVGAL----CYAELGTTISKSGGDYAYMLEVYGSLPAF---LKLWIELLIIRPSSQYIVALVFATYLLKPLFPTCPVPEEAAKLVACLCVL-LLTAVNCYSVKAATRVQDAFAAAKLLALALIILLGFVQIG----KGDVSNLDPNFSFEGTKLDVGNIVLALYSGLFAYGGWNYLNFVTEEMINPYRNLPLAIIISLPIVTLVYVLTNLAYFTTLSTEQMLSSEAVAVDFGNYHLGVMSWIIPVFVGLS-CFGSVNGSLFTSSRLFFVGSREGHLPSILSMIHPQLLTPVPSLVFTCVMTLLYAFSKDIFSVINFFSFFNWLCVALAIIGMIWLRHRKPELERPIKVNLALPVFFILACLFLIAVSFWKTPVECGIGFTIILSGLPVYFFGVWWKNKPKWLLQGIFSTTVLCQKLMQVVPQET |
| 3LRB Chain:A ((18-341)) | ---------------------------------------------------------MVSGNIMGSGVFLLPANL---ASTGGIAIYGW----LVTIIGALGLSMVYAKMSFLDPSPGGSYAYARRCFGPFLGYQTNVLYWLACWI-----GNIAMVVIGVGYLSYFFPILKDPL--VLTITCVVVLWIFVLLNIVGPKMITRVQ-----AVATVLALIPIVGIAVFGWFWFRGETYMAAWNVSGLGT---FGAIQSTLNVTLWSFIGVESASVAAGVVKNPKRNVPIATIGGVLIAAVCYVLSTTAIMGMIPN--------------------TAGAIVSFCAAAGCLGSLGGWTLLAGQTAKAAADDGLFPPIFARVN-KAGTPVAGLIIVGILMTIFQLSSISPNATKEFGLVSSVSVIFTLVPYLYTCAALLLLGHGHFGKARPAYLAVTTIAFLYCIWAVVGSGAKEVMWSFVTLMVITAMYALNYNRLHKNP---------------------- |
|
General information:
TITO was launched using:
| RESULT:
|
Template: 3LRB.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
|
3D Compatibility (PKB) -287050 for 2450 contacts (-117.2/contact) +
2D Compatibility (PS) -29969 + (NN) -12354 + (LL) 8860
1D Compatibility (HY) -23600 + (ID) 4150
Total energy: -348263.0 ( -142.15 by residue)
QMean score : 0.280
|
|
|