Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MELRSGSVGSQAVARRMDGDSRDGGGGKDATGSEDYENLPTSASVSTHMTAGAMAGILEHSVMYPVDSVKTRMQSLSPDPKAQYTSIYGALKKIMRTEGFWRPLRGVNVMIMGAGPAHAMYFACYENMKRTLNDVFHHQGNSHLANGIAGSMATLLHDAVMNPAEVVKQRLQMYNSQHRSAISCIRTVWRTEGLGAFYRSYTTQLTMNIPFQSIHFITYEFLQEQVNPHRTYNPQSHIISGGLAGALAAAATTP--LDVCKTLLNTQENVALSLANISGRLSGMA-NAFRTVYQLNGLAGYFKGIQARVIYQMPSTAISWSVYEFFKYFLTKRQLENRAPY |
5AHR Chain:A ((145-215)) | ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CSPEYTFPSQQEVIRFAINTAFEAVTLNPHALVVCGTYSIGKEKVFLAIADVLGSKVGMSQEKYKTLQCLNIPEINSLITTDMCSSLVHLLPMMQINFKGLQSHLKKCGGKYNQIL |
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General information:
TITO was launched using:
| RESULT:
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Template: 5AHR.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -9035 for 348 contacts (-26.0/contact) +
2D Compatibility (PS) -7270 + (NN) -1068 + (LL) 14128
1D Compatibility (HY) -6000 + (ID) 1050
Total energy: -10295.0 ( -29.58 by residue)
QMean score : 0.175
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