Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MPAPQRKHRRGGFSHRCFPTPQTAMTPQPAGPPDGGWGWVVAAAAFAINGLSYGLLRSL--GLAFPDLAEHFDRSAQDTAW---------ISALALAVQQAASPVGSALSTR-WGARPVVMVGGVLASLGFVFSAFASDLLHLY---LGLGLLAGFGWALVFAPALGTLSRYFSRRRVLAV----GLALTGNGASSLLLAP-------ALQLLLDTFGWRGALLLLGA-------ITLHLTPC-GALLLPLVLPGDPPAPPRSPLAA----LGLSLFTRRAFSIFALGTALVGGGYFVPYVHLAPHALDRGLGGYGAA-----LVVAVAAMGDAGARLVCGWLADQGWVPL--------------------------------------------PRLLAVFGAL------TGLGLWVV-----GLVPVVGGEESWG----GPLLAAA---------VAYGLSAG-SYAPLVFG----VLPGL----------VGVGGVVQATGLVMMLMSLGGLLGPPLSGFLRDETGDFTASFLLSGSLI---LSGSFIYIGLPRALPSC----------------------------------GPASPPATPPPETGELLPAPQAVLLSPGGPGSTLDTTC-------------------------- |
| 3F6K Chain:A ((11-672)) | RVRDFVAKLANNTHQHVFDDLRGSVSLSWVGD---STGVILVLTTFHVPLGQSKLYRSEDYGKNFKDITDLINNTFIRTEFGMAIGPENSGKVVLTAEVSGGSRGGRIFRSSDFAKNFVQTDLPFHPLTQMMYSPQNSDYLLALSTENGLWVSKNFGGKWEEIHKAVCLAKWGSDNTIFFTTYANGSCKADLGALELWRTSDLGKSFKTIGVKIYSFGLGGRFLFASVMADKDTTRRIHVSTDQGDTWSMAQLPSVGQEQFYSILAANDDMVFMHVDEPGDTGFGTIFTSDDRGIVYSKSLDRHLYTTTGGETDFTNVTSLRGVYITSVLSEDNSIQTMITFDQGGRWTHLRKPENSECDATAKNKNECSLHIHASYSISQKLNVPMAPLSEPNAVGIVIAHGSVGDAISVMVPDVYISDDGGYSWTKMLEGPHYYTILDSGGIIVAIEHSSRPINVIKFSTDEGQCWQTYTFTRDPIYFTGLASEPGARSMNISIWGFTESFLTSQWVSYTIDFKDILERNCEEKDYTIWLAHSTDPEDYEDGCILGYKEQFLRLRKSSMCQNGRDYVVTKQPSICLCSLEDFLCDFGYYRPENDSKCVEQPELKGHDLEFCLYGREEHLTTNGYRKIPGDKCQGGVNPVREVKDLKKKCTSNFLSPEK |
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General information:
TITO was launched using:
| RESULT:
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Template: 3F6K.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -336149 for 3328 contacts (-101.0/contact) +
2D Compatibility (PS) -49843 + (NN) -8168 + (LL) -388
1D Compatibility (HY) -8400 + (ID) 3200
Total energy: -406148.0 ( -122.04 by residue)
QMean score : 0.092
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