Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MYTSHEDIGYDFEDGPKDKKTLKPHPNIDGGWAWMMVLSSFFVHILIMGSQMALGVLNVEWLEE-FHQSRGLTAWVSSLSMGITLIVGPFIGLFINTCGCRQTAII---GGLVNSLGWVLSAYAANV-HYLFITFGVAAGLGSGMAYLPAVVMVGRYFQ---KRRALAQGLSTTGTGFGTFLMTVLLKYLCAEYGWRNAMLIQGAVSLNLCVCGALMRPLSPGKNPNDPGEKDVRGLPAHSTESVKSTGQQGRTEEKDGGLGNEETLCDLQAQECPDQAGHRKNMCALRILKTVSWLTMRVRKGFEDWYSGYFGTASLFTNRMFVAFIFWALFAYSSFVIPFI----HLPEIVNLYNLSEQNDVFPLTSIIAIVHIFGKVILGVIADLPCISVWNVFLLANFTLVLSIFILPLMHTYAGLAVICALIGFSSGYFSL-MPVVTEDLVGIEHLANAYGII-ICANGISALLGPPFAGWIYDITQKYDFSFYICGLLYMIGILFLLIQPCIRIIEQSRRKYMDGAHV |
| 2CFQ Chain:A ((24-393)) | ---------------------------------------------------GAYFPFFPIWLHDINHISKSDTGIIFAAISLFSLLFQPLFGLLSDKLGLRKYLLWIITGMLVMFAPFFIFIFGPLLQYNILV-GSIVGGIYLGFCFNAGAPAVEAFIEKVSRRSNFEFGRARMFGCVGWALGASIVGIMFT-INNQFVFWLGSGCALILAVLLFFAKTDAPSS---A-TVA--NAVG--A---------------------------------------------------NH---SAFSLK----------LALELFRQPKLWFLSLYVIGVSCTYDVFDQQFANFFTSFFATGEQGTRVFGY-VTTMGELLNASIMFFAPLIINRIGGKN--ALLLAGTIMSVRIIGSSFATSALEVVILKTLHMFEVPFLLVGCFKYITSQFEVRFSATIYLVCFCFFKQLAMIFMSVLAGNMYESIG-FQGAYLVLGLVALGFTLISVFTLSGPGPLSLLRRQVNEVA- |
|
General information:
TITO was launched using:
| RESULT:
|
Template: 2CFQ.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
|
3D Compatibility (PKB) -322826 for 2788 contacts (-115.8/contact) +
2D Compatibility (PS) -35333 + (NN) 5638 + (LL) 5824
1D Compatibility (HY) -20800 + (ID) 2200
Total energy: -369697.0 ( -132.60 by residue)
QMean score : 0.251
|
|
|