Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MSVRTLPLLFLNLGGEMLYILDQRLRAQNIPGDKARKDEWTEVDRKRVLNDII-----STMFNRKFMEELFKPQELYSKKALRTVY-ERLAHASIMKLNQASMDKLYDLMTMAFKYQVLLCPRPKDVLLVTFNHLDTIKGFIRDS-PTILQQVDETLRQLTEIYGGLSAGEFQLIRQTLLIFFQDLHIRVSMFLKDKVQNNNGRFVLPVSGPVPWGTEVPGLIRMFNNKGEEVKRIEFKHGGNYVPAPKEGSFELYGDRVLKLGTNMYSVNQPVETHVSGSSKNLASWTQESIAPNPLAKEELNFLARLMGGMEIKKPSGPEPGFRLNLFTTDEEEEQAALTRPEELSYEVINIQATQDQQRSEELARIMGEFEITEQPRLSTSKGDDLLAMMDEL |
| 4IP3 Chain:B ((33-168)) | ----------------------QRLLAEPVPGIKAEPDE----SNARYFHVVIAGPQDSPFEGGTFKLELFLPEE-YPMAAPKVRFMTKIYHPNVDKLGRICLDILKDKWSPALQIRTVLL--SIQALLSAPNPDDPLANDVAEQWKTNEAQAIETARAWTRLYAMNNI----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 4IP3.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -27665 for 896 contacts (-30.9/contact) +
2D Compatibility (PS) -12895 + (NN) 8397 + (LL) 16256
1D Compatibility (HY) -4800 + (ID) 2000
Total energy: -22707.0 ( -25.34 by residue)
QMean score : 0.215
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