Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MEVEEAFQAVGEMGIYQMYLCFLLAVLLQLYVATEAILIALVGATPSYHWDLAELLPNQSHGNQSAGEDQAFGDWLLTANGSEIHKHVHFSSSFTSIASEWFLIANRSYKVSAASSFFFSGVFVGVISFGQLSDRFGRKKVYLTGFALDILFAIANGFSPSY-------EFFAVTRFLVGMMNGGM------------------SLVAFVLLNECVGTAYWALAGSIGGLFFAVGIAQYALLGY---FIRSWRTLAILVNLQGTVVFLLSLFIPESPRWLYSQGRLSEAEEALYLIAKRNRKLKCTFSLTHPANRSCRETG--SFLDLF----RYRVLLGHTLILMFIWFVCSLVYYGLTLS-------------AGDLGGSIY----ANLALSGLIEIPSYPLCIYLINQKWFGRKRTLSAFLCLGGLACLIVMFLPEKKDTGVFAVVNSHSLSLLGKLTISAAFNIVYIYTSELYPTVIRNVGLGTCSMFSRVGGIIAPFIPSLKYVQWSLPFIVFGATGLTSGLLSLLLPETLNSPLLETFSDLQVYSYRRLGEEALSLQALDPQQCVDKESSLGSESEEEEEFYDADEETQMIK |
| 4J05 Chain:A ((71-470)) | ------------------------------------------------------------------------------------------------------LPAQRQDLMKAAANI---GCVVGQVMFGVLGDSFGRKFVYGKELILIIVATIFQMSAPSHWDGNRVLTWITICRVFLGIGIGGDYPMSATVVSDRANIHRRGTLLCFIFANQGWGS----FVGSLVTIVTISGFKHRLKSGHTHDVDKAWRILIGLSLIPAFGTLYQR---------------------------------------------------WQEFVAYFSTWNHFRNLLGS----MLGWFLVDIAFYGINLNQSVVLAQIGFAGKTGDVYDKLFQLATGNIIVTALGFLPGYYFTLFLIDI--VGRKKLQFMGFIMSGLFLAILAGEIDHIGKGPLLACFTFMQF----FFNFGANTTTFIVAAELFPTRIRASAHGISAAAGKCGAILSSLVFNQLKAKIGTSAVLWIFFSTCILGFISTFLIDETMGVDPDEKDLEERRAR--------------------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 4J05.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -226483 for 2127 contacts (-106.5/contact) +
2D Compatibility (PS) -27204 + (NN) -33 + (LL) 16592
1D Compatibility (HY) -19200 + (ID) 3850
Total energy: -260178.0 ( -122.32 by residue)
QMean score : 0.164
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