Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MAGSHPYFNLPDSTHPSPPSTPPSLHWHQRCQPSDATNGLLVALLGGGLPAGFVGPLSRMAYQASNLPSLELVICRCLFHLPIALLLKLRGDPLLGPPDIRGRTCFCALLNVLNIGCAYSAVQVVPTGNAAT-VRKHSSTVCSAILTLCLESQVLSGYDWCGLLGSILGLIIIVGPGLWTLQEGTTGVYTGLGYVQAFLGGLALSLGLLVYRSLHFPSCLPTVAFLSGLVGLLGSVPGLFVLQSPVLPSDLLSWSCVGAVGILTLVSFTCVGYAVTKAHPALVCAVLHSEVVMALILQYFMLHETVAPSDIMGAGVVLGSIAIITARNLICERTGKVEE |
3B5D Chain:A ((29-105)) | ---------------------------------------------------------------------------------------------------RLWPSVGTIICYCASFWLLAQTLAYIPTGIAYAIWS-GVGIVLISLLSWGFFGQRLDLPAIIGMMLICAGVLIINLLS------------------------------------------------------------------------------------------------------------------------------------------------------------------ |
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General information:
TITO was launched using:
| RESULT:
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Template: 3B5D.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -296089 for 2278 contacts (-130.0/contact) +
2D Compatibility (PS) -6608 + (NN) 1914 + (LL) 16040
1D Compatibility (HY) -4400 + (ID) 300
Total energy: -289443.0 ( -127.06 by residue)
QMean score : ?
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