Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MVGYDPKPDGRNNTKFQVAVAGSVSGLVTRALISPFDVIKIRFQLQHERLSRSDPSAKYHGILQASRQILQEEGPTAFWKGHVPAQILSIGYGAVQFLSFEMLTELVHRGSVYDAREFSVHFVC------GGLAACMATLTVHPVDVLRTRFAAQGEPKVYNTLRHAVGTMYR--SEGPQVFYKGLAPTLIAIFPYAGLQFSCYSSLKHLYKWAIPAEGKKNENLQNLLCGSGAGVISKTLTYPLDLFKKRLQVGGFEHARAAFGQVRRYKGLMDCAKQVLQKEGALGFFKGLSPSLLKAALSTGFMFFSYEFFCNVFHCMNRTASQR |
| 3ZXJ Chain:A ((246-369)) | ---------------------------------------------------------------------------------------------------------FAHQGGIVDAPDGTWHYVAFMDAYPGGRIPVVAPL----------RWTADGWPEVVTDSQGRWGTSYPIPVRGAKNATEGLASTDLDEF--RGTRFSEHWEWNH----------NPDTSKFTLLGGNEGGLILRTATVTGDLFAARNTLTRRIAGPKASGIFRLDVRGMRDGDRAGAVLFRDRAAYIGVWKQGNEARIVMVDDLRLNEDGWRTASTGRVAANG |
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General information:
TITO was launched using:
| RESULT:
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Template: 3ZXJ.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -25074 for 551 contacts (-45.5/contact) +
2D Compatibility (PS) -11747 + (NN) 2570 + (LL) 8484
1D Compatibility (HY) -3200 + (ID) 1950
Total energy: -30917.0 ( -56.11 by residue)
QMean score : 0.055
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