Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MEDSPTMVRVDSPTMVRGENQVSPCQGRRCFPKALGYVTGDMKELANQLKDKPVVLQFIDWILRGISQVVFVNNPVSGILILVGLLVQNPWWALTGWLGTVVSTLMALLLSQDRSLIASGLYGYNATLVGVLMAVFSDKGDYFWWLLLPVCAMSMTCPIFSSALNSMLSKWDLPVFTLPFNMALSMYLSATGHYNPFFPAKLVIPITTAPNISWSDLSALELLKSIPVGVGQIYGCDNPWTGGIFLGAILLSSPLMCLHAAIGSLLGIAAGLSLSAPFEDIYFGLWGFNSSLACIAMGGMF---MALTWQTHLLALGCALFTAYLGVGMANFMAEVGLPACTWPFCLATLLFLIMTTKNSNIYKMPLSKVTYPEENRIFYLQAKKRMVESPL |
4GQ9 Chain:H ((59-194)) | ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------HYNQKFKDKATLTVDKSSSTAYMQLSSLTSEDSA------VYYCARGVTRGYF--DVWGTGTTVTVSSAKTTAPSVY-------PLAPVCGGTTGSSVTLGCL-VKGYFPEPVTLTWNSGSLSSGVHTFPALLQSGLYTLSSSVTVTSNTWPSQTITCNVAHPASSTKVDKKIEPR------------------------ |
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General information:
TITO was launched using:
| RESULT:
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Template: 4GQ9.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -75783 for 697 contacts (-108.7/contact) +
2D Compatibility (PS) -13812 + (NN) 2547 + (LL) 16576
1D Compatibility (HY) -6800 + (ID) 1750
Total energy: -79022.0 ( -113.37 by residue)
QMean score : -0.218
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