Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MEAKEKQHLLDARPAIRSYTGSLWQEGAGWIPLPRPGLDLQAIELAAQSNHHCHAQKGPDSHCDPKKGKAQRQLYVASAICLLFMIGEVVEILGALVSVLSIWVVTGVLVYLAVERLISGDYEIDGGTMLITSGCAVAVNIIMGLTLHQSGHGHSHGTTNQQEENPSVRAAFIHVIGDFMQSMGVLVAAYILYFKPEYKYVDPICTFVFSILVLGTTLTILRDVILVLMEGTPKGVDFTAVRDLLLSV--EGVEALHSLHIWALTVAQPVLSVHIAIAQN---TDAQAVLKTASSRLQGKFHFHTVTIQIEDYSEDMKDCQACQGPSD |
| 3BYP Chain:A ((6-87)) | ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GLPPEEVERIRAFLQERIRGRALEVHDLKTRRAGPR-SFLEFHLVVRGDTPVEEAHRLCDELERALAQAFPGLQATIHVEPEG-------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 3BYP.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -52486 for 480 contacts (-109.3/contact) +
2D Compatibility (PS) -8251 + (NN) -1820 + (LL) 18076
1D Compatibility (HY) -2400 + (ID) 600
Total energy: -47481.0 ( -98.92 by residue)
QMean score : 0.413
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