Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MKKRALSLLLALCLCLSLMPAASASVVESTVQVGPYTFEIWFDGTATLTRYDESLAGSTYADIPASVTDENGQEYPVTVIGEKAFEETNITGVTVPDSVISIGRLAFAYCNSLSDVKLSENLIYINELAFASCDALKEITIPASVEKMDNPFRWSNALDTVYMEGMVAPE
M071 Chain:A ((10-197))
---------LALCLCLSLMPAASASVVESTVQVGPYTFEIWFDGTATLTRYDESLAGSTYADIPASVTDENGQEYPVTVIGEKAFEETNITGVTVPDSVISIGRLAFAYCNSLSDVKLSENLIYINELAFASCDALKEITIPASVEKMDNPFRWSNALDTVYMEGMVAPE
General information:
TITO was launched using:
RESULT:
Template:
M071.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -104762 for 1218 contacts (-86.0/contact) +
2D Compatibility (PS) -16649 + (NN) -941 + (LL) 1080
1D Compatibility (HY) -24400 + (ID) 8050
Total energy: -153722.0 ( -126.21 by residue)
QMean score : 0.317
(partial model without unconserved sides chains):
PDB file :
Tito_M071.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-M071-query.scw
PDB file :
Tito_Scwrl_M071.pdb
: