Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | -------------------------------------MDFVAGAIGGVCGVA-VGYPLDTVKVRIQTEPKYTGIWHCVRD------TYHRERVWGFYRGLSLPVCT-----VSLVSSVSFGTYRHCLAH--------ICRLRYGNPDAKPTKAD------ITLSGCASGLV-------------RVFLTSPTEVAKVR---------------LQTQTQAQKQQRRLSASGPLAVPPMCPVPPACPEPK---YRGPLHCLATVAREEGLCGLYKGSSALVLRDG-------HSFATYFLSYAVLCEWLSPAGHSRPDVPGVLVAGGCAGVLAWAVATPMDVIKSRLQA-------DGQGQRRYRGLLHCMVTSVREEGPRVLFKGLVLNCCRAFP-----VNMVV--------FVAYEAVLRLARGLLT----- |
| 4XR7 Chain:B ((1-456)) | MHSLLQYRSADQLFIPNNIREDLTKKNLSILQVFPSSGKVIPSIVQDYFNLVPLNFNNKTTLFKVFSN--YDGKAYVLKRLPNIDKSMNPNKISKIYQIWSKINCTNLIKFRDIFQTTKFGDLSICLVFDYYPNSLSLYDYHFVNFPKFPITNNYLWIYLVQLTNVINSIHSQNLSIGNTLNWRKVLITGDPGRIKLSHCNFMDLLFNDDTDTVVSSTIEGQQQLDYKYLGELLFNLSINIENSNNNTAPKEYRLEEITPQSIDDMRQIDDKFKDVLKYLISDNGDSKKSIHDLTSHF--YDKMFMVLESSQTYTEYMESVLSRELENGRL-FRLVNKLNCIFGRIESRIDINWSESGTKFPIILFYDYVFHQVDSNGKPIMDLTHVLRCLNKLDAGIQEKLMLVTPDELNCIIISYKELKDLIESTFRSITQH |
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General information:
TITO was launched using:
| RESULT:
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Template: 4XR7.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -153911 for 1751 contacts (-87.9/contact) +
2D Compatibility (PS) -30964 + (NN) 3371 + (LL) 216
1D Compatibility (HY) -24400 + (ID) 2250
Total energy: -207938.0 ( -118.75 by residue)
QMean score : 0.130
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