Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MKKRALSLLLALCLCLSLMPAASASVVESTVQVGPYTFEIWFDGTATLTRYDESLAGSTYADIPASVTDENGQEYPVTVIGEKAFEETNITGVTVPDSVISIGRLAFAYCNSLSDVKLSENLIYINELAFASCDALKEITIPASVEKMDNPFRWSNALDTVYMEGMVAPE
M073 Chain:A ((21-197))
--------------------AASASVVESTVQVGPYTFEIWFDGTATLTRYDESLAGSTYADIPASVTDENGQEYPVTVIGEKAFEETNITGVTVPDSVISIGRLAFAYCNSLSDVKLSENLIYINELAFASCDALKEITIPASVEKMDNPFRWSNALDTVYMEGMVAPE
General information:
TITO was launched using:
RESULT:
Template:
M073.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -105586 for 1111 contacts (-95.0/contact) +
2D Compatibility (PS) -15600 + (NN) -2413 + (LL) 2256
1D Compatibility (HY) -21200 + (ID) 7500
Total energy: -150043.0 ( -135.05 by residue)
QMean score : 0.366
(partial model without unconserved sides chains):
PDB file :
Tito_M073.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-M073-query.scw
PDB file :
Tito_Scwrl_M073.pdb
: