Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MKKRALSLLLALCLCLSLMPAASASVVESTVQVGPYTFEIWFDGTATLTRYDESLAGSTYADIPASVTDENGQEYPVTVIGEKAFEETNITGVTVPDSVISIGRLAFAYCNSLSDVKLSENLIYINELAFASCDALKEITIPASVEKMDNPFRWSNALDTVYMEGMVAPE
M074 Chain:A ((10-197))
---------LALCLCLSLMPAASASVVESTVQVGPYTFEIWFDGTATLTRYDESLAGSTYADIPASVTDENGQEYPVTVIGEKAFEETNITGVTVPDSVISIGRLAFAYCNSLSDVKLSENLIYINELAFASCDALKEITIPASVEKMDNPFRWSNALDTVYMEGMVAPE
General information:
TITO was launched using:
RESULT:
Template:
M074.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -120411 for 1171 contacts (-102.8/contact) +
2D Compatibility (PS) -16270 + (NN) 2817 + (LL) 1080
1D Compatibility (HY) -24400 + (ID) 8050
Total energy: -165234.0 ( -141.11 by residue)
QMean score : 0.350
(partial model without unconserved sides chains):
PDB file :
Tito_M074.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-M074-query.scw
PDB file :
Tito_Scwrl_M074.pdb
: