Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MELQPPEASIAVVSIPRQLPGSHSEAGVQGLSAGDDSELGSHCVAQTGLELLASGDPLPSASQNAEMIETGSDCVTQAGLQLLASSDPPALASKNAEVTGTMSQDTEVDMKEVELNELEPEKQPMNAASGAAMSLAGAEKNGLVKIKVAEDEAEAAAAAKFTGLSKEELLKVAGSPGWVRTRWALLLLFWLGWLGMLAGA-VVIIVRAP-----RCRE-------LPAQKWWHTGALYRIGDLQAFQG-H---------------------GAGNLAGLKGRLDYLSSLKVKGLVLGPIHKNQK-DDVAQTDLLQIDPNFGSKEDFDSLLQSAKKKSIRVILDLTPNYRG-ENSWFS-------------------------------------------TQVDTVATKVKDALEFWL-QAGVDGFQVRDIENLKDASSFLAEWQNITKGFSEDRLLIAGTNSSDLQQILSLLESNKDLLLTSSYLSDS--------GSTGEHTKSLVTQYLNATGN--RWCSWSL---SQARLLTSFLP--AQLLRLYQLMLFTLPGTPVFSYGDEIGLDAAALPGQPMEAPVMLWDESSFPDIPGAVSANMTVKGQSEDPGSLLSLFRRLSDQRSKERSLLHGDFHAFSAG--PGLFSYIRHWDQNERFLVVLNFGDVGLSAGLQASDLPASASLPAKAD-LLLSTQPGREEGSPLELERLKLEPHEGLLLRFPYAA |
| 1J0H Chain:A ((81-586)) | -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------RLRYG-FVLYSGEEKLVYTEKGFYFEVPTDDTAYYFCFPFLHRVDLFEAPDWVKDTVWYQIF-PERFANGNPSISPEGSRPWGSEDPTPTSFFGGDLQGIIDHLDYLVDLGITGIYLTPIFRSPSNHKYDTADYFEVDPHFGDKETLKTLIDRCHEKGIRVMLDAVFNHCGYEFAPFQDVWKNGESSKYKDWFHIHEFPLQTEPRPNYDTFAFVPQMPKLNTANPEVKRYLLDVATYWIREFDIDGWRLDVANEID--HEFWREFRQEVKALKPDVYILGEIWHDAM----PWLRGDQFDAVMNYPFTDGVLRFFAKEEISARQFANQMMHVLHSYPNNVNEAAFNLLGSHDTSRILTVCGGDIRKVKLLFLFQLTFTGSPCIYYGDEIGMTGGND---PECRKCMVWDPMQQ-------------------NKELHQHVKQLIALRKQYRSLRRGEISFLHADDEMNYLIYKKTDG-DETVLVIINRSDQKADIPI-----PL--DARGTWLVNLLTGER-FAA--EAETLCTSLPPYGFVLYAIEHW- |
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General information:
TITO was launched using:
| RESULT:
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Template: 1J0H.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -165507 for 3182 contacts (-52.0/contact) +
2D Compatibility (PS) -42589 + (NN) -11432 + (LL) 11856
1D Compatibility (HY) -28800 + (ID) 4550
Total energy: -241022.0 ( -75.75 by residue)
QMean score : 0.477
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