Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MYMKKLKFITLTLAIIITLPMLQSCLDDNDHQSRSLVISTINQISEDSKEFYFTLDNGKTMFPSNSQAWGGEKFENGQRAFVIFNELEQPVNGYDYNIQVRDITKVLTKEIVTMDDEENTEEKIGDDKINATYMWISKDKKYLTIEFQYYSTHSEDKKHFLNLVINNKEADSAAENEDNTDDEYINLEFRHNSERDSPDHLGEGYVSFKLDKIEEQIEGKKGLNIRVRTLYDGIKNYKVQFP
M079 Chain:A ((29-284))
----------------------------NDHQSRSLVISTINQISEDSKEFYFTLDNGKTMFPSNSQAWGGEKFENGQRAFVIFNELEQPVNGYDYNIQVRDITKVLTKEIVTMDDEENTEEKIGDDKINATYMWISKDKKYLTIEFQYYSTHSEDKKHFLNLVINNKEADSAAENEDNTDDEYINLEFRHNSERDSPDHLGEGYVSFKLDKIEEQIEGKKGLNIRVRTLYDGIKNYKVQFP
General information:
TITO was launched using:
RESULT:
Template:
M079.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -50636 for 1543 contacts (-32.8/contact) +
2D Compatibility (PS) -23142 + (NN) -10572 + (LL) 3068
1D Compatibility (HY) -26400 + (ID) 10700
Total energy: -118382.0 ( -76.72 by residue)
QMean score : 0.418
(partial model without unconserved sides chains):
PDB file :
Tito_M079.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-M079-query.scw
PDB file :
Tito_Scwrl_M079.pdb
: