Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MKKRILSLLGVIALFLGVILVSCGNDDDNKNTTGVHKIVVEQSGNTDDFDLNIAFGAANTGGVAKLYNENGEYLGDSYLVNKVTENKISCQTGKEGSMMTCAGSVISTSEQAGKKLKISVIAYIDNKEVNRLEKEYITKGSTLVENFSVSTTSVE
M079 Chain:A ((28-157))
---------------------------DNKNTTGVHKIVVEQSGNTDDFDLNIAFGAANTGGVAKLYNENGEYLGDSYLVNKVTENKISCQTGKEGSMMTCAGSVISTSEQAGKKLKISVIAYIDNKEVNRLEKEYITKGSTLVENFSVSTTSVE
General information:
TITO was launched using:
RESULT:
Template:
M079.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -38476 for 930 contacts (-41.4/contact) +
2D Compatibility (PS) -13742 + (NN) -5336 + (LL) 2208
1D Compatibility (HY) -15600 + (ID) 6400
Total energy: -77346.0 ( -83.17 by residue)
QMean score : 0.437
(partial model without unconserved sides chains):
PDB file :
Tito_M079.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-M079-query.scw
PDB file :
Tito_Scwrl_M079.pdb
: