Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MNKRLLTVAAFALAGCVTVVAQDKKKEFKMPTGYAGITHEMSEFYEPVPPVVTPGTDLKGGGFTAPSDAIVLFDGKDLSAWESVKGGAAEWDVHDGVFTVNKKKGDIQTKQKFNDFQMHIEWQVPTNI-TGESQSRGNSGIFLQGMYEVQVLDCYN-----NPTYVNGQTGSIY-KQSIPLANAMRKPGEWNVYDIIYTAPTFKED----GSYRTHPTVTVIQNGVVLQNHTTILGTTEWIGFPQVKKHGAGPIILQ-SHGDPSEPISFRNIWIREL |
| 3S5Q Chain:A ((23-214)) | -----------------------------------------------------------------------LFD-KDLS---NADYDSSVWTFKNGILTATADQS-IWTKVQYENFILDLEFKTDVNTNSGVVIYCTDKGNWIPSSIEIQIADDHHPEWQSYPEY--WRCGSIYGHKGANEQLVVKKPGEWN--RMIITAKGQQIDIELNGKHIVSANLADWTSGTTNPDGTEI---PEWLPIPYANMPTKGYIGLQGKHGESN--IWFRNIQLKQL |
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General information:
TITO was launched using:
| RESULT:
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Template: 3S5Q.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -35296 for 1349 contacts (-26.2/contact) +
2D Compatibility (PS) -19536 + (NN) -4440 + (LL) 4784
1D Compatibility (HY) -7600 + (ID) 2800
Total energy: -64888.0 ( -48.10 by residue)
QMean score : 0.237
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