Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MEVKSLLMVMATLTIAGCSQNEMTEMNPDTNRTIGLDVYTEVQTRGTETTTSTLKANAGFGIFAYQTSSAGWNSEKGNTTPNFMYNEHATWTSDSWGYTNLRFWPIDDKKITFFAYAPYESKPEVGTDQKITLSGQNAKGAPTITFEVKTSNNWKDMIDLVTDCHTAIQDQTNESNKGTVQFKF-SHVLTQIANIKVKPDVNLGTDTKIFVTGLKLDPGSTTLYNKAVYKFDNDTWEAISPDASYFSTEQDLSDFLNKTTTDQWGYNKSSINVSDDQNATAL-FSDTEALYFIPVNNKNGTTNAGDLKLKINYDIVTKVTDTSNLTSTITNKEVSLPKNTFKKGTKHTYVLTIKMNAIKITVED-NMEGWTDDSDSDINVEK |
| 3SY6 Chain:A ((8-279)) | -------------------------SGEKTLAVVSASSDDRPSTRGI-----INDNTYALGVFRTTANTYA-------------PLYNVKHIYSGGEWGADDVIKVDYRNASFFAYYPYHTA-----------TGNYAGLAGGTTLTLQAQLFNAGE-DICYGAGEASGGGPVSVYNPFVEFLNMKHAYARL-RLTLTRGEKFDKTKKCNIQNITFKSNNANFYLTRSLDIASTAGAT-----------------GGSAVAAGYVHNPNVNIATGKSVTYEYMF--------PPQPLDGS-----KLTILVTVD------------GVTRSCDISTLGSSLDSGKYYGVSLTFTDVGIILSSAVVTVNNF------------ |
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General information:
TITO was launched using:
| RESULT:
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Template: 3SY6.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -8685 for 2057 contacts (-4.2/contact) +
2D Compatibility (PS) -28730 + (NN) -7252 + (LL) 6276
1D Compatibility (HY) -5200 + (ID) 1700
Total energy: -45291.0 ( -22.02 by residue)
QMean score : 0.180
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