Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MALSLCVLFTLASVVSGHVAHPSLGRGDGFPFLWDNAASTLDQLNGTDTTIILNGFNYLDRLSMFKTVLEGTRKYFDSFAPNNTANIYWGFTIYLNWILATGRSADPTGHTTCGLAHGDPMCLAEESWWNCIKYNPAAIAFFAAKKAGIFGDVTKTIVLAKPKEANSP--YCSSEEECQAAYPDVMATYLDYFEYLMSLEKTGESIDMDKAQQLLWKAHVTSMENSIAVCKPRLKNYNIIERQLDRDYLISLLYFAATNFPTNFIESIKFVADMPHRQLRFGDIAPFIPDMDMKKNNLLVVLHGFYTVHSLSGGSSLTHWRNLMESPVSREMARDMVNLILAGTPVEVQVELAKLGIPTPVDYKDDDK |
| 3GHE Chain:L ((23-145)) | ----------------------------------------------TGTSTDVNGYNYVSWYQQYAGKAPKLIIFDVSKRPSGVSNRFSG-----------SKSGDTASLTISGLQAED------EADYHCSSYT-------SSTPYVLFGGGTKLTVLGQPKAAPSVTLFPPSSEELQANKATLVCLISDFY------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 3GHE.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) 3972 for 703 contacts (5.7/contact) +
2D Compatibility (PS) -12675 + (NN) 1619 + (LL) 17568
1D Compatibility (HY) -2400 + (ID) 1750
Total energy: 6334.0 ( 9.01 by residue)
QMean score : -0.021
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