Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | -MGPNAVEL-TTDQAWCLADVLGAGSYPWVLAITPPYSDHSQRSAFLAAQSAELTRMGVVNSAGAVDPRVAQWITTVCRATQWLDLRFVSGPGDLLRGMVARRSEETVVALRNAQLVTFTAMDIGHQHALVPVLTAGLSGRKPARFDDFALPAAAGARADEQIRNGAPLAEVLEFLGVPPSARPLVESVFDGRRTYVEIVAGEHRDGHRVTTEVGVSIIDTPHGRILVHPTKAFDGEWISTFTPGSADAIAMAVERLTASLPSGSWFPDQPLTRDFDEDAA-THREPVLQRRTQKA |
| 1O9G Chain:A ((2-250)) | SAYRHAVERMDSSDLACGVVLHSAPGYP----------------AFPVRLATEIFQRALARLPG--DGPVTLWDPCCG-----------SGYLLTVLGLLHRRSLRQVIASD----VDPAPLELAAKNLAL-LSPAGLTARELERREQSERFGK--PSYLEAAQAARRLRERLTAEGGALPCAIRTADVFD-PRALSAVLAGSAPD--VVLTDLPYGERTHWEGQVPGQPVAGLLRSLASAL---PAHAVIAVTDR-SRKIPVAPVKALERLKIG-TRSAVMVRAADVLEAGP--- |
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General information:
TITO was launched using:
| RESULT:
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Template: 1O9G.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) 19064 for 1999 contacts (9.5/contact) +
2D Compatibility (PS) -24776 + (NN) 2760 + (LL) 2660
1D Compatibility (HY) 14800 + (ID) 1000
Total energy: 13508.0 ( 6.76 by residue)
QMean score : 0.092
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