Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | CSFGIENTAGGSAVFHNYTRGASNSVTKNNQLLGGYGSRPWLGSTYTEHSNAALHFLGAGDTSATNHGGWIRLLVTPKGKTISDRVPAFRLSDNGDLWLVPDGAMHSDLGLVRSIETLNAAVPRFNAPSIQDGRGLKIVAPQAPEIDLIAPRGSGASAPAIRAMWCDGSLADTTRYIGAT-QPGSTFYIGASGHDGEKFDSMRGSVAIKS-AGG-WGPTSTPTQVVLETCESGSISRLPRWGVDHNGTLMPM-ADNRYNLGWG-SGRVKQVYAVNGTINTSDARLKNDVRAMSDPETEAAKAIAKEIG-FWTWKEQADMNDIREHCGLTVQRAIEIMESFGLDPFKYGFICYDKWDEHTVVSEYGPANEDGTENPIYKTIPAGDHYSFRLEELNLF-IAKGFEARLSAIEDKLGM |
| 3G3L Chain:A ((10-305)) | ---PAEAKYYIAGTITDATTG--QELTTAKVTLGDKSVT----SSFNEQVN--------------YKAEGYALVVSADGYYPVKRQVYLNQVSDGQ----------------TSVATVNVALVSVEAAVIP-----PVVPPTDPETDINEGEATKVADKAVEVA-------KPSESTVTDMLAGTT----ATPEEKKALDETL------EMAGGMKVGETTPEVL-----ADGSILAITPVKFTNPIQDAPAMVPYFYNEGCELTGDVKEVAA--------------PVAVAADIQKAFLSNAAKALNMNAGFVQKIGYTRISVLNGYSIL----------------GYTIKGQLVSKKLTFLIS-----------------GKYYEGIVSYQKSVMIYPNYYS----------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 3G3L.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) 42373 for 2226 contacts (19.0/contact) +
2D Compatibility (PS) -29341 + (NN) 4903 + (LL) 6336
1D Compatibility (HY) -5200 + (ID) 2850
Total energy: 16221.0 ( 7.29 by residue)
QMean score : 0.139
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