Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MKMRVYSLLFMMLFALSIGANAQVKFFTDVNSKQIKT-----LQVKVAGELISEPYIALGGEEQIEINFDGLGSGYTRYAYNV-VHCNADWTQSQLSPIEYMNGF-------QGTTIDDFANSIGTTTQYSNYRLLLPNDDVQFKVSGNYAIQVYNEDTPDQIIFTACFSVVEPVVNISASVSGNTDIDTNQSHQQVSFNINNKNFPITYPQTDLKIFVYQDNRRDNAVTDLQPMSILENQISYTYNRNLIFPAGNEYRRMEFLSNKYNGMHVENISFHNPYYNVELMTDYRRDKGTYQYDQDQDGRFFIRCSDCNDPDTEADYYIVHFTLACDPLPDGSVYLNGELFNNVLDEKSKMGYNFETKQYEKAVLLKQGSYNYQYLFVPTGSSVGQTGPIEGNYYQTQNEYSI-------YVYYRPMGARYDRLIGVTTVRNEMQVF |
| 1KK1 Chain:A ((6-410)) | --SRQAEVNIGMVGHVDHGKTTLTKALTGVWTDSEELRRGITIKIGFADAEIRRCPNCGRYSTSPVCPYCGHETEFVRRVSFIDAPGHEALMTTMLAGASLMDGAILVIAANEPCPRPQTREHLMALQIIGQKNIIIAQNKIEL-VDKEKALENYRQIKEFIEGTVAENA---PIIPISALHGANIDVLVKAIEDFIPTPKRDPN-----KPPKMLVLRSFDVNKPGKLVGGVLDGSIVQG-KLKVGDEIEIRPGVPYEEHGRIKYEPITTEIVSLQA-----------------GGQFVEEAYPGGLVGVGTKLDPYLTKGDLMAGNVVGKPGKLPP--VWDSLRLEVHLLERVVEQELKVEP--------IKRKE--VLLLNVGTARTMGLVTGLGKDEIEVKLQIPVCAEPGDRVAISRQIGSRW-RLIGYGIIKE----- |
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General information:
TITO was launched using:
| RESULT:
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Template: 1KK1.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -68284 for 3010 contacts (-22.7/contact) +
2D Compatibility (PS) -39282 + (NN) -1000 + (LL) 3680
1D Compatibility (HY) -8000 + (ID) 2450
Total energy: -115336.0 ( -38.32 by residue)
QMean score : 0.090
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