Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | -MSAFSRFTPLIQSLPASVPFVGPEALERQHGRKIAARIGANESGFGPAPSVLLAIRQAAGDTWKYADPENHDLKQALARHLGTSPANIAIGEGIDGLLGQIVRLVVEAGA-PVVTSLGGYPTFNYHVAGHGGRLVTVPYADDRE-DLEGLLAAVGRENAPLVYLANPDNPMGSWWPAERVVAFAQALPETTLLVLDEAYCETAPRDALPPIESLIDKPNVIRARTFSKAYGLAGARIGYTLSTPGTAQAFDKIRNHFGMSRIGVAAAIAALADQDY--LKEVTLKIANSRQRIGRIAADSGLAPL--PSATNFVAVDCGKDASYARAIVDRLMSDHGIFIRMPGVAP-LNRCIRISTAPDAEMDLLAAALPEVIRSLAAT |
| 1IJI Chain:A ((3-356)) | TVTITDLARENVRNLTPYQS-------ARRLGGNGDVWLNANEYPTAVEF------QLTQQTLNRYPECQPKAVIENYAQYAGVKPEQVLVSRGADEGIELLIRAFCEPGKDAILYCPPTYGMYSVSAETIGVECRTVPTLDNWQLDLQGISDKL--DGVKVVYVCSPNNPTGQLINPQDFRTLLELTRGKAIVVADEAYIEFCPQA--SLAGWLAEYPHLAILRTLSKAFALAGLRCGFTLANEEVINLLMKVIAPYPLSTPVADIAAQALSPQGIVAMRERVAQIIAEREYLIAALKEIPCVEQVFDSETNYILARFKASSAVFKSLWDQ-----GIILRDQNKQPSLSGCLRITVGTREESQRVIDALRAEQV----- |
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General information:
TITO was launched using:
| RESULT:
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Template: 1IJI.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -182764 for 2862 contacts (-63.9/contact) +
2D Compatibility (PS) -38246 + (NN) -26414 + (LL) 2360
1D Compatibility (HY) -13200 + (ID) 3750
Total energy: -262014.0 ( -91.55 by residue)
QMean score : 0.485
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