Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MASWSHPQFEKGADDDDKSEPPVSMLMQVAGAVETSKGGEKWAPVTRNKFLFVGTQVRTGADGGGKLIDQNSGMAQTIGANSVVEITAAGPKAVSGSLSAPEAASGDLVAGLSNRFAEAQRYTTVRRSVKKEAADLKLRVASDITLSPTYPDLVWENMGAQYGYTLVIDGTSHAVPATSGEMVRFRVPSLTPGAHSFGVTVTEGGQAVGQTEK--GGTIVWLSATEDKALVDGVARVKAASTGDEFALGNYLDSKGVTVAAMDAYRKHFASHKDDNDMRPLLIKTYNDLKLRDLRQKEALVYNEQLEGNPGFSSISAHHHHHHHHHH |
3V1T Chain:C ((213-278)) | ------------------------------------------------------------------------------------------------------------------------------------------------------------------GKVAIVTGAARGIGATIAEVFA------RDGAHVVAIDVESAAENLAETASKVGGTALWLDVTADDA-VDKIS-------------------------------------------------------------------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 3V1T.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -8352 for 440 contacts (-19.0/contact) +
2D Compatibility (PS) -7115 + (NN) -3778 + (LL) 14644
1D Compatibility (HY) -4400 + (ID) 1000
Total energy: -10001.0 ( -22.73 by residue)
QMean score : 0.033
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