Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | -----MFFSKDEKNPI-----KRALQGELL------QNEPFIQLCTKIENYLMDT---EAVNEQLIELNEQLTMRLKEKGLKPGEKGATKQLRTLIQEILTEAGFREGMLQTIGNKPLKKE---DFMFLVSSGFMLKDSSLRASSHGELTHAIQWCLIILKQKKDSSFLENIPTSEICDRIYKKLGHQDSSNPN---------YPFTCWDVLIDKLGEIDSR-----SPEWLSDH---------------IQNDEDQIFPVLREVIKNRTEK--------GKTEENKGKLQKKLENPPEHYEKHEEIENILMPKPK- |
| 4COS Chain:A ((6-319)) | RNDFYCWVCHREGQVLCCELCPRVYHAKCLRLTSEPEGDWFCPECEKITVAECIETQSKAMTMLTIEQLSYLLKFAIQKMKQPGTDAFQKPVPLEQHPDYAEYIFHPMDLCTLEKNAKKKMYGCTEAFLADAKWILHNCIIYNGGNHKLTQIAKVVIKICEHEMNEIEVCPECYLAACQKRDNWFC-EPCSNPHPLVWAKLKGFPFWPAKALRDKDGQVDARFFGQHDRAWVPINNCYLMSKEIPFSVKKTKSIFNSAMQEMEVYVENIRRKFGVFNYSPFRTPYTPNSQYQMLLDPTNPSAGTAKIDQ---EKVKL |
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General information:
TITO was launched using:
| RESULT:
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Template: 4COS.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) 50162 for 1620 contacts (31.0/contact) +
2D Compatibility (PS) -26007 + (NN) -7326 + (LL) 632
1D Compatibility (HY) -5600 + (ID) 2400
Total energy: 9461.0 ( 5.84 by residue)
QMean score : 0.180
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