Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | ---MKLLNTLVCIIGLTSFSSSAKLVNAEHLDALYQKVTVANKTELGLIHIYSEFPDYRWVKDPIEGVSAIDDVARAAIFYQRQYQATGSAADLEKVKSLVEFILYQRADNGYFYNFIYPDHSINKEYKTSVAEPNWWTWRALWALTQVYPTL-VKTDNALAQRTRETIFATIDVIYKDFNFKQTRGEKEGVAVPEWLPHTAGDQASVLLMALSDAQALEAKPEIEKMMRSLAA-GIMLMQVKDTSSPVNGAFLSWQNLWHGYGNSQAYALLVAGNRLGDRDMIKAAF-----NELDHFHPWLISNGLLNEFTVRQQGEKVTLIEQKKFSQIAYIIRPMVFANIKAWEISRDAVYLERAVDLSLWFFKNNPAQAQMYYPVTGIAFDGIDSATTVNKNSGAESTIEALLTLQLIESIPDAKRMLESALEKRNIKQ |
| 4C0K Chain:A ((6-409)) | ELTSACKKSLVRIFKICDIDGD-NLLNDYELNLFQRRCFNTPLQPQILDEVKAVIQKN--VPDGIYN-DAVT--LKGFLFLHCLFIQRGRNETTWAVLRRFGY----NDQLEMCQEYLRPPLKIPPGSSTEL------SHRGQQFLIAVFERYDRDGDGALSPEEHKMLFST----CPAAPWSYSTDIRKSCPINE-------TTGWVTLHGWLCRWTLMTLIDVVKTMEYLAYLGFNVHENDSQLAAIHVTRERRIDLAKRQSSRSVYKCHVIGPKGSGKTGMCRGFLVEDMHKLIGKEFKTNVVNCINSVQVYGQEKHLILRDIDVRHALDPLQPQEVNCDVACLVYDSSN---PRSFEYVARIYIKYYAESKIPVMIVGTKCDMDERRQDYLMQPSEFCDKYKLLPPHLFSLKTNKKELYTKLATMAAFPH |
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General information:
TITO was launched using:
| RESULT:
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Template: 4C0K.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -71414 for 3047 contacts (-23.4/contact) +
2D Compatibility (PS) -41890 + (NN) -12705 + (LL) 2884
1D Compatibility (HY) -14000 + (ID) 2650
Total energy: -139775.0 ( -45.87 by residue)
QMean score : 0.229
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