Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
SDTRKAIDTISNLLKIKPIYIESMLQEMGPRQTQMFIRSTSNGSAEEVRKAAYLVFIYHTFIKNPSDENV--ELWRNTLIRAQISPILAAEHTDAALFYF----AELDLDAFELAQFRRHYNLHFNPEPGTLLH---
1A9X Chain:A ((1-127))
MPKRTDIKSILILGAGPIV----------IGQACEFDYSGAQACKALREEGYRVINVNSNPATIMTDPEMADATYIEPIHWEVVRKIIEKERPDAVLPTMGGQTALNCALELERQGVLEEFGVTMIGATADAIDKAE
General information:
TITO was launched using:
RESULT:
Template:
1A9X.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -39363 for 903 contacts (-43.6/contact) +
2D Compatibility (PS) -12346 + (NN) -2291 + (LL) 1016
1D Compatibility (HY) -1600 + (ID) 750
Total energy: -55334.0 ( -61.28 by residue)
QMean score : 0.140
(partial model without unconserved sides chains):
PDB file :
Tito_1A9X.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1A9X-query.scw
PDB file :
Tito_Scwrl_1A9X.pdb
: