Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MATTRSLDHAKAEAELAINIKKATSPEETAPKRKHVRSCIVYTWDHKSSLSFWAGLKVQPILADE----------VQTFKALITIHKVLQEGHPVTLREAMANRGWIDSLSRGMMGEGVRGY--GPLIREYVHFLLAKLSFHKQHPEFNGTFEYEEYISLKAIHDPNEGYETITDLMTLQDKIDQFQKLIFSHFRHIGNNECRISALVPLVAESYGIYKFITSMLRAMHSSTGDNEALEPLRQRYDAQHYRLVKFYYECSNLRYLTSLITIPKL |
| 3ZYM Chain:A ((22-147)) | --------HSVTGSAVSKTVCKATTHEIMGPKKKHLDYLIQCTNEMNVNI---------PQLADSLFERTTNSSWVVVFKSLITTHHLMVYGNERFI-QYLASRNTLFNLSNFLDKSGLQGYDMSTFIRRYSRYLNEKAVSYRQ---------------------------------------------------------------------------------------------------------------------------------- |
|
General information:
TITO was launched using:
| RESULT:
|
Template: 3ZYM.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
|
3D Compatibility (PKB) -32312 for 767 contacts (-42.1/contact) +
2D Compatibility (PS) -12403 + (NN) -9182 + (LL) 11000
1D Compatibility (HY) -5600 + (ID) 1800
Total energy: -50297.0 ( -65.58 by residue)
QMean score : 0.194
|
|
|