Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MFQKKTYAVFLILLLMMFTAACSGSKTSAEKKESETEKSSDIAQVKIKDVSYTLPSKYDKSTSDDQLVLKVNVAVKNTGKDPLNVDSMDFTLYQGDTKMSDTDPEDYSEKLQGSTINADKSVEGNLFFVVDKGKQYELNYTPESYGDKKPKSVTFKIDGKDKKILATADKLQDSAKALSAYVDVLLFGKDNADFEKITGANKN--EIVNDF---NESAKDGYLSASGLSSTYADSKALDNIVNGIKEGLSKNSSIQAKTTSIS-KDEAIVEATVKPVDASSLSDRIEDKVKDYYSKNSSASYEEAVKYALQVYPEEFKKLGPASSEKTVEVKMKKNDIDQWQLDMDDYRAAELVEAFIKE |
| 3V1H Chain:A ((91-216)) | --------------------------------------------------------------------------------------------------------------------------------------------------------------------------LDDAKYYLSAYPNETIVMSMKKDYDSDSKVTKTFEEIFREYYYNNPQYQNLFYTGSNANPTLKETKGKIVLFNRMG-GTYIKSGYGADTSGIQWADNATFETKI---NNGSLNLKVQDEYKDYYDKKVEA------------------------------------------------------------ |
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General information:
TITO was launched using:
| RESULT:
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Template: 3V1H.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) 20917 for 704 contacts (29.7/contact) +
2D Compatibility (PS) -12720 + (NN) -834 + (LL) 14840
1D Compatibility (HY) -6400 + (ID) 1600
Total energy: 14203.0 ( 20.17 by residue)
QMean score : 0.087
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