Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | ATMAFHPMLCRLELSVSAAPPASPIDATLLRSLITSVLNSSWVDLGGNTANEKVLCAIGLIEAFCRERVIPPTSNSFNTSVTYHIMVEDLDPDDLGNIQLINKPLLSLEGDLKVLGSYQLTFQTIPGHSEPRSMTDNGIYHSDSPFFQIALGHALLGTGKIYDHITRALRVAPITIAPEKRKEPLSSYMV |
1G8W Chain:A ((7-42)) | ------------------------------------------------------------------------------------------------NFQRFNETNLILQRDASVSSSGQLRLTNLNGNGEPR---------------------------------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 1G8W.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -10142 for 154 contacts (-65.9/contact) +
2D Compatibility (PS) -3812 + (NN) -1779 + (LL) 9672
1D Compatibility (HY) -1200 + (ID) 700
Total energy: -7961.0 ( -51.69 by residue)
QMean score : 0.082
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