Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MAAATAAAALAAADPPPAMPQAAGAGGPTTRRDFYWLRSFLAGGIAGCCAKTTVAPLDRVKVLLQAHNHHY---------KHLGVFSALRAVPQKEGFLGLYKGNGAMMIRIFPYGAIQFMAFEHYKTLITTKLGISGHVHRLMAGSMAGMTAVICTYPLDMVRVRLAFQVKG--EHSYTGIIHAFKTIYAKEGGFFGFYRGLMPTILGMAPYAGVSFFTFGTLKSVGLSHAPTLLGRPSSDNPNVLVLKTHVNLLCGGVAGAIAQTISYPFDVTRRRMQLGTVLPEFEKCLTMRDTMKYVYGHHGIRKGLYRGLSLNYIRCIPSQAVAFTTYELMKQFFHLN |
| 2LCK Chain:A ((14-300)) | ------------------------------------TVKFLGAGTAACIADLITFPLDTAKVRLQIQGESQGLVRTAASAQYRGVLGTILTMVRTEGPRSLYNGLVAGLQRQMSFASVRIGLYDSVKQFYTKGSEHAGIGSRLLAGSTTGALAVAVAQPTDVVKVRFQAQARAGGGRRYQSTVEAYKTI-AREEGIRGLWKGTSPNVARNAIVNCAELVTYDLIKDTLLKANLMT-------------DDLPCHFTSAFGAGFCTTVIASPVDVVKTRYMNSALG----QYHSAGHCALTMLRKEG-PRAFYKGFMPSFLRLGSWNVVMFVTYEQLKRALMAA |
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General information:
TITO was launched using:
| RESULT:
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Template: 2LCK.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -79016 for 1554 contacts (-50.8/contact) +
2D Compatibility (PS) -27771 + (NN) 10582 + (LL) 2684
1D Compatibility (HY) -7200 + (ID) 3550
Total energy: -104271.0 ( -67.10 by residue)
QMean score : -0.096
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