Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MTHQDLSITAKLINGGVAGLVGVTCVFPIDLAKTRLQNQHGKAMYKGMIDCLMKTARAEGFFGMYRGAAVNLTLVTPEKAIKLAANDFFRRLLMEDGMQRNLKMEMLAGCGAGMCQVVVTCPMEMLKIQLQDAGRLAVHHQGSASAPSTSRSYTTGSASTHRRPSATLIAWELLRTQGLAGLYRGLGATLLRDIPFSIIYFPLFANLNNLGFNELAGKASFAHSFVSGCVAGSIAAVAVTPLDVLKTRIQTLKKGLGEDMYSGITDCARKLWIQEGPSAFMKGAGCRALVIAPLFGIAQGVYFIGIGERILKCFD |
| 1ZY9 Chain:A ((322-376)) | --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------FDLFSSLRKMGYRYFKIDFLFA-----GAVPGERKK-NITPIQAFRKGIETIRKAVGEDSFILGCGSPLLPAVGCVDGMRIGPDTAPFWGEHIEDNGAPAARWALRNAITRYFMH |
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General information:
TITO was launched using:
| RESULT:
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Template: 1ZY9.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -16360 for 278 contacts (-58.8/contact) +
2D Compatibility (PS) -5539 + (NN) 122 + (LL) 15128
1D Compatibility (HY) -4800 + (ID) 900
Total energy: -12349.0 ( -44.42 by residue)
QMean score : 0.359
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