Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MENKEAGTPPPIPSREGRLQPTLLLATLSAAFGSAFQYGYNLSVVNTPHKVFKSFYNETYFERHATFMDGKLMLLLWSCTVSMFPLGGLLGSLLVGLLVDSCGRKGTLLINNIFAIIPAILMGVSKVAKAF-----------------------ELIVFSRVVLGVCAGISYSALPMYLGELAPKNLRGMVGTMTEVFVIVG---VFLAQIF---SLQAILGNPAGWPVLLALTGVPALLQLLTLPFFPESPRYSLIQKGDEATARQALRRLRGHTDMEAELEDMRAEARAERAEGHLSVLHLCALRSLRWQLLSIIVLMAGQQLSGINAINYYADTIYTSAGVEAAHSQYVTVGSGVVNIVMTITSAVLVERLGRRHLLLAGYGICGSACLVLTVVLLFQNRVPELSYLGIICVFAYIAGHSIGPSPVPSVVRTEIFLQSSRRAAFMVDGAVHWLTNFIIGFLFPSIQEAI-------GAYSFIIFAGICLLTAIYIYVVIPETKGKTFVEINRIFAKRNRVKLPEEKEETIDAGPPTASPAKETSF |
| 4GBZ Chain:A ((66-479)) | -------------------------------------------------------------------------------------IGCIIGGALGGYCSNRFGRRDSLKI-------AAVLFFISGVGSAWPELGFTSINPDNTVPVYLAGYVPEFVIY-RIIGGIGVGLASMLSPMYIAELAPAHIRGKLVSFNQFAIIFGQLLVYCVNYFIARSGDASWLNTDGWRYMFASECIPALLFLMLLYTVPESPRW-LMSRGKQEQAEGILRKIMGNTLATQAVQEIKHSLDHGRKTGGRLLMFGVGVIVIG-VMLSIF-----QQFVGINVVLYYAPEVFKTLGASTDIALLQTIIVGVINLTFTVLAIMTVDKFGRKPLQII--GALGMAIGMFSLGTAFYTQAPGI--VALLSMLFYVAAFAMSWGPVCWVLLSEIFPNAIRGKALAIAVAAQWLANYFVSWTFPMMDKNSWLVAHFHNGFSYWIYGCMGVLAALFMWKFVPETKGKTLEELEALWE------------------------------ |
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General information:
TITO was launched using:
| RESULT:
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Template: 4GBZ.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -257310 for 3223 contacts (-79.8/contact) +
2D Compatibility (PS) -39119 + (NN) -7372 + (LL) 7952
1D Compatibility (HY) -38800 + (ID) 5500
Total energy: -340149.0 ( -105.54 by residue)
QMean score : 0.269
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