Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MAPSRLQLGLRAAYSGISSVAGFSIFLVWTVVYRQPGTAAMGGLAGVLALWVLVTHVMYMQDYWRTWLKGLRGFFFVGVLFSAVSIAAFCTFLVLAITRHQSLTDPTSYYLSSVWSFISFKWAFLLSLYAHRYRADFADISILSDF
2B2H Chain:A ((246-288))
-----------SLGIVSGAIAGLAAITPAAGFVDVKGAIVIGLVAGIVCYLAMDFRIKKKIDESLDAWAIHGIGGLWGSVAVGILANPEVNGYAGLLFGNPQLLVSQLIAVASTTAYAFLVTLILAKAVDAAVGLRVSSQEEYVGL
General information:
TITO was launched using:
RESULT:
Template:
2B2H.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -20682 for 221 contacts (-93.6/contact) +
2D Compatibility (PS) -3923 + (NN) 5116 + (LL) 860
1D Compatibility (HY) -1200 + (ID) 300
Total energy: -20129.0 ( -91.08 by residue)
QMean score : 0.067
(partial model without unconserved sides chains):
PDB file :
Tito_2B2H.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2B2H-query.scw
PDB file :
Tito_Scwrl_2B2H.pdb
: