Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MPAPQRKHRRGGFSHRCFPTPQTAMTPQPAGPPDGG-WGWVVAAAAFAINGLSYGLLRSLGLAF-PDLAEHF-----DRSAQDTAWISALALAVQQAASPVGSALSTRWGARPVVMVGGVLASLGFVFSAFASDLLHLYLGLGLLAGFGWALVFAPALGTLSRYFSRRRVLAVGLALTGNGASSLLLAPALQLLLDTFGWRGALLLLGAITLHLTPCGALLLPLVLPGDPPAPPRSPLAALGLSLFTRRAFSIFALGTALVGGGYFVPYVHLAPHALDRGLGGYGAALVVAVAAMGDAGARLVCGWLADQGWVPLPRLLAVFGALTGLGLWVVGLVPVVGGEESWGGPLLAAAVAYGLSAGSYAPLVFGVLPGLVGVGGVVQATGLVMMLMSLGGLLGPPLSGFLRDETGDFTASFLLSGSLILSGSFIYIGLPRALPSCGPASPP----ATPPPETGELLPAPQAVLLSPGGPGSTLDTTC |
| 4WGV Chain:A ((5-399)) | ---------------VGYMDPGNWITSMQGGAQYGYTLLFVILISSLAAMLLQSMTVR-LGIATGKDLAQMTRHFLSKPVAIIFWIIAELAIIATDIAEVIGSAIALDLIFGIPLIVGALIT----VFDVFLLLFIMRFGFRKIEAIVGTLIFTVLAIFVFEVFISSPQLTDI---LNGFVPHKEIVTN-QGILYIALGIIGATIMPHNLYLHSSIVQSRKYDR--HDNEEKAQAIKYATIDSNLQLSIAFVVNCLLLTLGAALFF--------GTKTNDLGG----------------------------------FYDLYHALKTE--------PVLG--ATLGGVMSTLFAVALLASGQNSTITGTLAGQIVMEGFLRLSIPNWLRRLITRSLAVIPVIICLIIFKGN---SEKIEQLLVFSQVFLSIALPFSLIPLQLATSNKKLMGPFINKTWVNIISWTLIVILSGLNVY------ |
|
General information:
TITO was launched using:
| RESULT:
|
Template: 4WGV.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
|
3D Compatibility (PKB) -248641 for 3265 contacts (-76.2/contact) +
2D Compatibility (PS) -39828 + (NN) -9458 + (LL) 5528
1D Compatibility (HY) -21200 + (ID) 3750
Total energy: -317349.0 ( -97.20 by residue)
QMean score : 0.141
|
|
|