Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MPVEEFVAGWISGALGLVLGHPFDTVKVRLQTQTTYRGIVDCMVKIYRHESLLGFFKGMSFPIASIAVVNSVLFGVYSNTLLVLTATSHQERRAQPPSYMHIFLAGCTGGFLQAYCLAPFDLIKVRLQNQTEPRAQPGSPPPRYQGPVHCAASIFREEGPRGLFRGAWALTLRDTPTVGIYFITYEGLCRQYTPEGQNPSSATVLVAGGFAGIAS----WVAATPLDMIKSRMQMDGLRRRVYQGMLDCMVSSIRQEGLGVF-FRGVTINSARAFPVNAVTFLSYEYLLRWWG |
4AFY Chain:A ((56-146)) | ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------NYEVLLRLLNPQGQEVPPAEFLHAAKEAGLAEKIDRWVILNSIKLLAEH------RAKGHQTKLFVHLSSASLQDPGLLPWLGVALKAARLPPESLVFQISEADATSYLK |
|
General information:
TITO was launched using:
| RESULT:
|
Template: 4AFY.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
|
3D Compatibility (PKB) -14728 for 487 contacts (-30.2/contact) +
2D Compatibility (PS) -8703 + (NN) -2789 + (LL) 12564
1D Compatibility (HY) -4400 + (ID) 1350
Total energy: -19406.0 ( -39.85 by residue)
QMean score : 0.033
|
|
|