Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MVGYDPKPDGRNNTKFQVAVAGSVSGLVTRALISPFDVIKIRFQLQHERLSRSDPSAKYHGILQASRQILQEEGPTAFWKGHVPAQILSIGYGAVQFLSFEMLTELVHRGSVYDAREFSVHFVC------GGLAACMATLTVHPVDVLRTRFAAQGEPKVYNTLRHAVGTMYR--SEGPQVFYKGLAPTLIAIFPYAGLQFSCYSSLKHLYKWAIPAEGKKNENLQNLLCGSGAGVISKTLTYPLDLFKKRLQVGGFEHARAAFGQVRRYKGLMDCAKQVLQKEGALGFFKGLSPSLLKAALSTGFMFFSYEFFCNVFHCMNRTASQR |
| 3ZXK Chain:A ((246-369)) | ---------------------------------------------------------------------------------------------------------FAHQGGIVDAPDGTWHYVAFMDAYPGGRIPVVAPL----------RWTADGWPEVVTDSQGRWGTSYPIPVRGAKNATEGLASTDLDEF--RGTRFSEHWEWNH----------NPDTSKFTLLGGNEGGLILRTATVTGDLFAARNTLTRRIAGPKASGIFRLDVRGMRDGDRAGAVLFRDRAAYIGVWKQGNEARIVMVDDLRLNEDGWRTASTGRVAANG |
|
General information:
TITO was launched using:
| RESULT:
|
Template: 3ZXK.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
|
3D Compatibility (PKB) -24964 for 537 contacts (-46.5/contact) +
2D Compatibility (PS) -11656 + (NN) 3206 + (LL) 8484
1D Compatibility (HY) -3200 + (ID) 1950
Total energy: -30080.0 ( -56.01 by residue)
QMean score : 0.109
|
|
|