Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MKKRILSLLGVIALFLGVILVSCGNDDDNKNTTGVHKIVVEQSGNTDDFDLNIAFGAANTGGVAKLYNENGEYLGDSYLVNKVTENKISCQTGKEGSMMTCAGSVISTSEQAGKKLKISVIAYIDNKEVNRLEKEYITKGSTLVENFSVSTTSVE
M080 Chain:A ((28-158))
---------------------------DNKNTTGVHKIVVEQSGNTDDFDLNIAFGAANTGGVAKLYNENGEYLGDSYLVNKVTENKISCQTGKEGSMMTCAGSVISTSEQAGKKLKISVIAYIDNKEVNRLEKEYITKGSTLVENFSVSTTSVE
General information:
TITO was launched using:
RESULT:
Template:
M080.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -35794 for 934 contacts (-38.3/contact) +
2D Compatibility (PS) -13726 + (NN) -5566 + (LL) 2208
1D Compatibility (HY) -15600 + (ID) 6400
Total energy: -74878.0 ( -80.17 by residue)
QMean score : 0.449
(partial model without unconserved sides chains):
PDB file :
Tito_M080.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-M080-query.scw
PDB file :
Tito_Scwrl_M080.pdb
: