Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MTLNLSVDEVLTTTRSVRKRLDFDKPVPRDVLMECLELALQAPTGSNSQGWQWVFVEDAAKKKAIADVYLANARGYLSGPAPEYPDGDTRGERMGRVRDSATYLAEHMHRAPVLLIPCLKGREDESAVGGVSFWASLFPAVWSFCLALRSRGLGSCWTTLHLLDNGEHKVADVLGIPYDEYSQGGLLPIAYTQGIDFRPAKRLPAESVTHWNGW
M082 Chain:A ((1-288))
MTLNLSVDEVLTTTRSVRKRLDFDKPVPRDVLMECLELALQAPTGSNSQGWQWVFVEDAAKKKAIADVYLANARGYLSGPAPEYPDGDTRGERMGRVRDSATYLAEHMHRAPVLLIPCLKGREDESAVGGVSFWASLFPAVWSFCLALRSRGLGSCWTTLHLLDNGEHKVADVLGIPYDEYSQGGLLPIAYTQGIDFRPAKRLPAESVTHWNGW
General information:
TITO was launched using:
RESULT:
Template:
M082.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -106713 for 1684 contacts (-63.4/contact) +
2D Compatibility (PS) -23078 + (NN) -10195 + (LL) 0
1D Compatibility (HY) -29600 + (ID) 10700
Total energy: -180286.0 ( -107.06 by residue)
QMean score : 0.511
(partial model without unconserved sides chains):
PDB file :
Tito_M082.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-M082-query.scw
PDB file :
Tito_Scwrl_M082.pdb
: