Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MKKRVIFLLTGLFIWTSVLLAQNVPEGVIGAFKEGNSQELNKYLGDKVDLIIQNKSTHADKRTAEGTMAAFFSNHKVGSFNVNHQGKRDESGFVIGILMTANGNFRVNCFFRKVQNKYVIHQIRIDKTDE
M083 Chain:A ((23-141))
----------------------NVPEGVIGAFKEGNSQELNKYLGDKVDLIIQNKSTHADKRTAEGTMAAFFSNHKVGSFNVNHQGKRDESGFVIGILMTANGNFRVNCFFRKVQNKYVIHQIRIDKTDE
General information:
TITO was launched using:
RESULT:
Template:
M083.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -56158 for 747 contacts (-75.2/contact) +
2D Compatibility (PS) -11448 + (NN) -868 + (LL) 2696
1D Compatibility (HY) -13600 + (ID) 5400
Total energy: -84778.0 ( -113.49 by residue)
QMean score : 0.488
(partial model without unconserved sides chains):
PDB file :
Tito_M083.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-M083-query.scw
PDB file :
Tito_Scwrl_M083.pdb
: