Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
YDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDGKTIKAQIWDTAGQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLKELRDHADSNIVIMLVGNKSDLRHLRAVPTDEARAFAEKNNLSFIETSALDSTNVEEAFKNILTEIYRIVSQKQIADCAAHDESPGNNVVDISVPPTTD
M083 Chain:A ((1-186))
YDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDGKTIKAQIWDTAGQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLKELRDHADSNIVIMLVGNKSDLRHLRAVPTDEARAFAEKNNLSFIETSALDSTNVEEAFKNILTEIYRIVSQKQIADCAAHDESPGN------------
General information:
TITO was launched using:
RESULT:
Template:
M083.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -122365 for 1465 contacts (-83.5/contact) +
2D Compatibility (PS) -20757 + (NN) -9886 + (LL) 344
1D Compatibility (HY) -24800 + (ID) 9300
Total energy: -186764.0 ( -127.48 by residue)
QMean score : 0.581
(partial model without unconserved sides chains):
PDB file :
Tito_M083.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-M083-query.scw
PDB file :
Tito_Scwrl_M083.pdb
: