Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MELQPPEASIAVVSIPRQLPGSHSEAGVQGLSAGDDSELGSHCVAQTGLELLASGDPLPSASQNAEMIETGSDCVTQAGLQLLASSDPPALASKNAEVTGTMSQDTEVDMKEVELNELEPEKQPMNAASGAAMSLAGAEKNGLVKIKVAEDEAEAAAAAKFTGLSKEELLKVAGSPGWVRTRWALLLLFWLGWLGMLAGAVVIIVRAPRCRELPAQKWW---HTGALYRIGDLQAFQG---HGAGNLAGLKGRLDYLSSLKVKGLVLGPIHKNQK-DDVAQTDLLQIDPNFGSKEDFDSLLQSAKKKSIRVILDLTPNYRG-ENSWFST-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------QV------DTVATKVKDALEFWLQAGVDGFQVRDIENLKD------ASSFLAEWQNITKGF------SEDRLLIAGTNSSDLQQILSLLESNKDLLLTSSYLSDS---GS---TGEHTKSLVTQYLNAT----GNRWCSWSL--SQARLLTSFLP--AQLLRLYQLMLFTLPGTPVFSYGDEIGLDAAALPGQPMEAPVMLWDESSFPD----IPGAVS-ANMTVKGQSEDPGSLLSLFRRLSDQRSKERSLLHGDFHAFSA--------GPGLFSYIRHWDQNERFLVVLNFGDVGLSAGLQASDLPASASLPAKADLLLSTQPGREEGSPLELERLKLEPHEGLLLRFPYAA |
| 3K8K Chain:A ((24-668)) | ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LTASPDTWDETKRADISYQLL-LYSFADSDGDGYGDLNGVTQKLDYLNQLGVKALWLSPIHPCMSYHGYDVTDYTKVNPQLGTESDFDRLVTEAHNRGIKIYLDYVMNHTGTAHPWFTEASSSSESPYRNYYSFSEDPKTDIAAGKIAMITQEGAAGYNAAEWFQVSDETAAVKGLLKFTLDWSNAPSPILVVSTGTKADEDNPDTGTDNAKYLYYGEDICKKFYDKGNNIYELTVDFESTWGLLIRTSNASFWPSGTKYGASSSSEKLALNKDFKLTNAGNPANIMFDSQQITYFHSHFCTDWFADLNYGPVDQAGESPAYQAIADAAKGWIARGVDGLRLDAVKHIYHSETSEENPRFLKMFYEDMNAYYKQKGHTDDFYMIGEVLSEYDK-VAPYYK--GLPALFEFSFWYRLEWGINNSTGCYFAKDILSYQQKYANYRSDYIEATKLSNHDEDRTSSKLGKSADKCKLAAAVLLTSAGHPYIYYGEELGLYGTKDNGDEYVRSPMLWGDSYTTNYTDKTDATVSKNVKTVADQQADTHSLLNIYFSLTRLRNTYPALAEGNMTKHSVYNESQEKDYKPIAAWYMTKD-NEKLLVIHNFGGTAMQLPL-----TD----K-IEKVLFVNGETQQ-NTDSDSYTLKLGGYASVVFKLGN-- |
|
General information:
TITO was launched using:
| RESULT:
|
Template: 3K8K.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
|
3D Compatibility (PKB) -138574 for 3305 contacts (-41.9/contact) +
2D Compatibility (PS) -42204 + (NN) -15225 + (LL) 15048
1D Compatibility (HY) -23200 + (ID) 4950
Total energy: -209105.0 ( -63.27 by residue)
QMean score : 0.449
|
|
|