Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MEHSEGAPGDPAGTVVPQELLEEMLWFFRVEDASPWNHSILALAAVVVIISMVLLGRSIQASRKEKMQPPEKETPEVLHLDEAKDHNSLNNLRETLLSEKPNLAQVELELKERDVLSVFLPDVPETES
3WGU Chain:G ((29-48))
--------------------------------------GGLIFAALAFIVGLIIILSK----------------------------------------------------------------------
General information:
TITO was launched using:
RESULT:
Template:
3WGU.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -5865 for 70 contacts (-83.8/contact) +
2D Compatibility (PS) -2346 + (NN) -3408 + (LL) 6952
1D Compatibility (HY) -3200 + (ID) 200
Total energy: -8067.0 ( -115.24 by residue)
QMean score : -0.137
(partial model without unconserved sides chains):
PDB file :
Tito_3WGU.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3WGU-query.scw
PDB file :
Tito_Scwrl_3WGU.pdb
: