Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MMVMKRPSLRQFSWLLGGSLLLGALFWLWLAVQQQEATLAIRPVGQGIGMPDGFSVWHHLDANGIRFKSITPQKDGLLIKFDSTAQGAAAKEVLGRALPHGYIIALLEDDNSPTAWLSRLRDAPHRLG
4EYT Chain:A ((10-106))
----KQNCLIKIINIPQGTL-------------KAEVVLAVRHLG------YEFYCDYIDGQAMIRFQNSDEQRLAIQ-KLLNHNNNKLQIEIRG---QICDVISTIPEDEEKNYWNYIKFKKN----
General information:
TITO was launched using:
RESULT:
Template:
4EYT.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -1670 for 638 contacts (-2.6/contact) +
2D Compatibility (PS) -10141 + (NN) 2176 + (LL) 3388
1D Compatibility (HY) -2800 + (ID) 1000
Total energy: -10047.0 ( -15.75 by residue)
QMean score : 0.067
(partial model without unconserved sides chains):
PDB file :
Tito_4EYT.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-4EYT-query.scw
PDB file :
Tito_Scwrl_4EYT.pdb
: