Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MKKNSLYIISSLFFACVLFVYATATNFQNSTSARQVK-TETYTNTVTNVPIDIRYNSDKYFISGFASEVSVVLTGANRLSLASEMQESTRKFKVTADLTDAGVGTIEVPLSIEDLPNGLTAVATPQKITVKIGKKAQKDKVKIVPEIDPSQIDSRVQIENVMVSDKEVSITSDQETLDRIDKIIAVLPTSERITGNYSGSVPLQAIDRNGVVLPAVITPFDTIMKVTTKPVAPSSSTSNSSTSSSSETSSSTKATSSKTN |
1S1H Chain:D ((19-196)) | YESSRLDAELKL---------AGEFGLKNKKEIYRISFQLSKIRRAARDLLTRDEKDPKRLFEG--------NALIRRLVRVGVLSEDKKKLDYVLAL----------------------------KVEDFLERRLQTQVYKLGLAKSVHHARVLITQRHIAVGKQIVNIPSFMVRLDSEKHI------DFAPTSPFGGA-------------------------------RPGRVARRNAARKAEASGEAADEADEADE |
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General information:
TITO was launched using:
| RESULT:
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Template: 1S1H.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) 78760 for 1333 contacts (59.1/contact) +
2D Compatibility (PS) -18097 + (NN) 1858 + (LL) 6396
1D Compatibility (HY) -2400 + (ID) 1200
Total energy: 65317.0 ( 49.00 by residue)
QMean score : 0.084
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